We offer advanced phylogenetic analysis and molecular evolution services focused on the study of evolutionary relationships, genetic history, and diversification mechanisms of genes, proteins, and complete genomes. Our analyses are designed to answer specific evolutionary questions and are applicable to all types of organisms, including viruses, bacteria, eukaryotes, model organisms, and humans.

We perform robust phylogenetic reconstructions based on multiple sequence alignments of nucleotide or protein sequences, combining automated approaches with manual curation to ensure the quality and reliability of evolutionary inferences. We use consensus approaches and advanced evolutionary models for phylogenetic reconstruction and taxonomic/systematic classification.

We develop molecular evolution analyses, including positive and negative selection studies, conservation patterns, substitution rates, and evolutionary dynamics, enabling the identification of functional regions under selective pressure and adaptive diversification events.

Our services also include comparative analyses based on homology, Hidden Markov Model (HMM) profiles, and studies of gene families, protein domains, and gene expansion, providing a detailed view of the functional evolution of genes and proteins.

We also perform phylogenetic analyses applied to virology and molecular epidemiology, allowing the study of pathogen evolution, relationships among strains, and evolutionary dynamics in different experimental or population contexts.

All phylogenetic analyses are developed in a modular way and can be integrated with genomic, structural, or multi‑omics studies, always maintaining a focus on evolutionary and molecular inference.