Build a sequence logo, using the information-theory-based methodology to generate graphical representations of the consensus sequence of gapped and ungapped protein and DNA alignments. The server also compiles HMMER, allowing you to build a HMM-profile and a majority-rule consensus sequence from the same alignment.
Alignment Format Converter
Convert, in a sole step, one alignment from an original format to one or more different formats; It supports Clustal, Phylip, Stockholm, Fasta, MSF, and Pir formats.
Join independent multiple alignments into one single alignment (only the fasta format is allowed).
RMXSC (Obsolete, not available anymore)
RMXSC is a tool for converting Reference Manager's exported databases in XML format to a file in SQL format suitable for most common database engines filtering non useful information and avoiding repeated entries. This tool is presented as a web server but it can also be downloaded for its installation on any computer by Biotechvana Bioinformatics subscribers.
R-TOOLS is an in-progress collection of scripts for statistical analysis mainly (but not exclusively) developed in R where each script can be accessed via a web inteface for you to upload the input file (formatted as a csv file) and then to fill the distinct fields where correspond to tune the analysis.